If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 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'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ), 'gf_id' => 'HOM05D000516', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000516' ), 'data_identifier' => 'HOM05D000516', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000516', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1046', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A03p17550' => 'bna', 'A03p22830' => 'bna', 'A04p15960' => 'bna', 'A04p15970' => 'bna', 'A04p15980' => 'bna', 'A04p16010' => 'bna', 'A04p16020' => 'bna', 'A04p24320' => 'bna', 'A04p31050' => 'bna', 'A05p01830' => 'bna', 'A05p14230' => 'bna', 'A05p21810' => 'bna', 'A06p08170' => 'bna', 'A06p48850' => 'bna', 'A08p07450' => 'bna', 'A08p23960' => 'bna', 'A08p35870' => 'bna', 'A08p36130' => 'bna', 'A09p58400' => 'bna', 'A09p58410' => 'bna', 'A09p66750' => 'bna', 'A10p04690' => 'bna', 'A10p05420' => 'bna', 'Aa31LG1G7940' => 'aar', 'Aa31LG3G1500' => 'aar', 'Aa31LG5G5580' => 'aar', 'Aa31LG6G16350' => 'aar', 'Aa31LG6G9730' => 'aar', 'Aa31LG7G15250' => 'aar', 'Aa31LG7G15260' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.848' => 'aag', 'Actinidia00119' => 'ach', 'Actinidia08772' => 'ach', 'Actinidia10658' => 'ach', 'Actinidia13652' => 'ach', 'Actinidia15397' => 'ach', 'Actinidia15398' => 'ach', 'Actinidia17802' => 'ach', 'Actinidia20652' => 'ach', 'Actinidia23840' => 'ach', 'Actinidia27080' => 'ach', 'Actinidia27082' => 'ach', 'Actinidia27852' => 'ach', 'Actinidia33585' => 'ach', 'Actinidia34493' => 'ach', 'Actinidia34585' => 'ach', 'Actinidia37318' => 'ach', 'Ah.05g167800' => 'amhyb', 'Ah.07g202350' => 'amhyb', 'Ah.08g215500' => 'amhyb', 'Ah.13g073800' => 'amhyb', 'Ah.15g095970' => 'amhyb', 'AL1G16020' => 'aly', 'AL1G16860' => 'aly', 'AL1G51820' => 'aly', 'AL3G24700' => 'aly', 'AL3G45160' => 'aly', 'AL3G45190' => 'aly', 'AL4G10350' => 'aly', 'AL4G10360' => 'aly', 'AL4G26620' => 'aly', 'AL4G38490' => 'aly', 'AL7G10780' => 'aly', 'Aqoxy2G00695' => 'aox', 'Aqoxy2G04127' => 'aox', 'Aqoxy4G02404' => 'aox', 'Aqoxy5G01463' => 'aox', 'Aqoxy5G02127' => 'aox', 'Aqoxy6G02330' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05P1IU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.16U9TH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1B2Z8C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3M73WP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4YG78R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5KF5UG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5XCD2W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.99PJJG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A6EHAN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B9TTNC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CBXJ5J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D6MJAY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0KCEK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IH0HR2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K23Z11' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KC1CFT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KX9K6H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MHQ5U3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NC1Z37' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NEJ4KC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RZ4L5S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP1BM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y85KKW' => 'arhy', 'AT1G06070' => 'ath', 'AT1G06850' => 'ath', 'AT1G43700' => 'ath', 'AT2G12900' => 'ath', 'AT2G12940' => 'ath', 'AT2G13150' => 'ath', 'AT2G21230' => 'ath', 'AT2G21235' => 'ath', 'AT2G24340' => 'ath', 'AT2G31370' => 'ath', 'AT2G40620' => 'ath', 'AT4G38900' => 'ath', 'ATR0147G013' => 'atr', 'ATR0743G138' => 'atr', 'ATR0772G133' => 'atr', 'ATR1127G033' => 'atr', 'Atru.chr1.2502' => 'acertr', 'Atru.chr12.175' => 'acertr', 'Atru.chr13.2195' => 'acertr', 'Atru.chr3.2938' => 'acertr', 'Atru.chr4.1259' => 'acertr', 'Atru.chr5.3161' => 'acertr', 'Atru.chr5.3173' => 'acertr', 'Atru.chr5.545' => 'acertr', 'AUR62002345' => 'cqu', 'AUR62009733' => 'cqu', 'AUR62010368' => 'cqu', 'AUR62013552' => 'cqu', 'AUR62013553' => 'cqu', 'AUR62014406' => 'cqu', 'AUR62016851' => 'cqu', 'AUR62019143' => 'cqu', 'AUR62023846' => 'cqu', 'AUR62024931' => 'cqu', 'AUR62026729' => 'cqu', 'AUR62030616' => 'cqu', 'AUR62036211' => 'cqu', 'BcaB01g03527' => 'bca', 'BcaB01g03528' => 'bca', 'BcaB01g03529' => 'bca', 'BcaB01g03530' => 'bca', 'BcaB02g06764' => 'bca', 'BcaB02g10387' => 'bca', 'BcaB02g11370' => 'bca', 'BcaB03g12229' => 'bca', 'BcaB04g17749' => 'bca', 'BcaB05g24058' => 'bca', 'BcaB06g28552' => 'bca', 'BcaB06g29157' => 'bca', 'BcaB08g34973' => 'bca', 'BcaB08g34974' => 'bca', 'BcaB08g35375' => 'bca', 'BcaB08g36887' => 'bca', 'BcaC01g00262' => 'bca', 'BcaC01g05392' => 'bca', 'BcaC02g07325' => 'bca', 'BcaC02g07979' => 'bca', 'BcaC02g08807' => 'bca', 'BcaC02g08808' => 'bca', 'BcaC02g08809' => 'bca', 'BcaC02g11237' => 'bca', 'BcaC02g12727' => 'bca', 'BcaC05g24312' => 'bca', 'BcaC05g24655' => 'bca', 'BcaC05g27667' => 'bca', 'BcaC06g32557' => 'bca', 'BcaC07g37441' => 'bca', 'BcaC07g41165' => 'bca', 'BcaC07g41166' => 'bca', 'BcaC07g42044' => 'bca', 'BcaC07g42539' => 'bca', 'BcaC08g44547' => 'bca', 'BcaNung01296' => 'bca', 'BcaNung01957' => 'bca', 'BcaNung01958' => 'bca', 'BcaNung01961' => 'bca', 'BolC3t14456H' => 'bol', 'BolC3t15089H' => 'bol', 'BolC3t19994H' => 'bol', 'BolC4t21861H' => 'bol', 'BolC4t23426H' => 'bol', 'BolC4t26640H' => 'bol', 'BolC4t26641H' => 'bol', 'BolC4t27600H' => 'bol', 'BolC4t28344H' => 'bol', 'BolC5t29209H' => 'bol', 'BolC5t29272H' => 'bol', 'BolC5t32391H' => 'bol', 'BolC7t46765H' => 'bol', 'BolC8t47030H' => 'bol', 'BolC8t47066H' => 'bol', 'BolC8t47764H' => 'bol', 'BolC8t51735H' => 'bol', 'BolC8t51736H' => 'bol', 'BolC8t52625H' => 'bol', 'BolC9t58621H' => 'bol', 'BraA03t11023Z' => 'bra', 'BraA03t11507Z' => 'bra', 'BraA04t17232Z' => 'bra', 'BraA04t17233Z' => 'bra', 'BraA04t17235Z' => 'bra', 'BraA04t17238Z' => 'bra', 'BraA04t17239Z' => 'bra', 'BraA04t17240Z' => 'bra', 'BraA04t17951Z' => 'bra', 'BraA04t18561Z' => 'bra', 'BraA05t19181Z' => 'bra', 'BraA05t20354Z' => 'bra', 'BraA05t21102Z' => 'bra', 'BraA06t27753Z' => 'bra', 'BraA08t34354Z' => 'bra', 'BraA08t35494Z' => 'bra', 'BraA08t35520Z' => 'bra', 'BraA09t41229Z' => 'bra', 'BraA09t41230Z' => 'bra', 'BraA09t42013Z' => 'bra', 'BraA10t42733Z' => 'bra', 'C03p20680' => 'bna', 'C03p27080' => 'bna', 'C03p76060' => 'bna', 'C03p77380' => 'bna', 'C04p02130' => 'bna', 'C04p18960' => 'bna', 'C04p50430' => 'bna', 'C04p61150' => 'bna', 'C04p68440' => 'bna', 'C05p04350' => 'bna', 'C05p05000' => 'bna', 'C05p36520' => 'bna', 'C07p63510' => 'bna', 'C08p02380' => 'bna', 'C08p02700' => 'bna', 'C08p09150' => 'bna', 'C08p41720' => 'bna', 'C08p50970' => 'bna', 'CAN.G1271.7' => 'can', 'CAN.G1329.1' => 'can', 'CAN.G136.21' => 'can', 'CAN.G175.6' => 'can', 'CAN.G24.12' => 'can', 'CAN.G466.13' => 'can', 'CAN.G545.4' => 'can', 'CAN.G62.51' => 'can', 'CANSAT11G1174' => 'cansat', 'CANSAT25G0716' => 'cansat', 'CANSAT25G1128' => 'cansat', 'CANSAT54G2132' => 'cansat', 'CANSAT56G4430' => 'cansat', 'CANSAT78G1650' => 'cansat', 'CARHR005590' => 'chi', 'CARHR006540' => 'chi', 'CARHR035540' => 'chi', 'CARHR125000' => 'chi', 'CARHR135730' => 'chi', 'CARHR247860' => 'chi', 'Carub.0001s0540' => 'cru', 'Carub.0001s0616' => 'cru', 'Carub.0001s3472' => 'cru', 'Carub.0003s2784' => 'cru', 'Carub.0003s2786' => 'cru', 'Carub.0004s0026' => 'cru', 'Carub.0004s0027' => 'cru', 'Carub.0004s1269' => 'cru', 'Carub.0004s2291' => 'cru', 'Carub.0007s0075' => 'cru', 'Ca_01250_v3' => 'car', 'Ca_05707_v3' => 'car', 'Ca_09577_v3' => 'car', 'Ca_13399_v3' => 'car', 'Ca_15054_v3' => 'car', 'Ca_16868_v3' => 'car', 'Ca_19931_v3' => 'car', 'Ca_25990_v3' => 'car', 'Ca_29826_v3' => 'car', 'CBR_g66661' => 'cbr', 'CBR_g80425' => 'cbr', 'Cc00_g03570' => 'ccan', 'Cc00_g21780' => 'ccan', 'Cc01_g15300' => 'ccan', 'Cc02_g05410' => 'ccan', 'Cc02_g16830' => 'ccan', 'Cc10_g01970' => 'ccan', 'CDE04G0382' => 'cde', 'CDE04G1737' => 'cde', 'CDE04G3323' => 'cde', 'CDE05G0591' => 'cde', 'CDE05G1115' => 'cde', 'CDE08G1281' => 'cde', 'CDE09G0718' => 'cde', 'CDE12G0509' => 'cde', 'Cfa011829' => 'cfa', 'Cfa013918' => 'cfa', 'Cfa015191' => 'cfa', 'Cfa018333' => 'cfa', 'Ciclev10001058m.g' => 'ccl', 'Ciclev10001715m.g' => 'ccl', 'Ciclev10018090m.g' => 'ccl', 'Ciclev10020263m.g' => 'ccl', 'Ciclev10028062m.g' => 'ccl', 'Ciclev10032076m.g' => 'ccl', 'CiPaw.01G097700' => 'cil', 'CiPaw.01G306300' => 'cil', 'CiPaw.02G052300' => 'cil', 'CiPaw.05G074200' => 'cil', 'CiPaw.06G127400' => 'cil', 'CiPaw.07G152900' => 'cil', 'CiPaw.08G064000' => 'cil', 'CiPaw.13G063800' => 'cil', 'CiPaw.14G050700' => 'cil', 'CiPaw.15G017200' => 'cil', 'CiPaw.16G014000' => 'cil', 'ClCG02G004450' => 'cla', 'ClCG02G004460' => 'cla', 'ClCG02G019030' => 'cla', 'ClCG05G007170' => 'cla', 'ClCG05G007200' => 'cla', 'ClCG06G010640' => 'cla', 'ClCG07G005090' => 'cla', 'ClCG08G006930' => 'cla', 'ClCG09G009660' => 'cla', 'COL.COLO4_08326' => 'col', 'COL.COLO4_10080' => 'col', 'COL.COLO4_11212' => 'col', 'COL.COLO4_24675' => 'col', 'COL.COLO4_26177' => 'col', 'Cpa.g.sc150.7' => 'cpa', 'Cpa.g.sc19.62' => 'cpa', 'Cpa.g.sc2.298' => 'cpa', 'Cpa.g.sc21.185' => 'cpa', 'Cpa.g.sc81.160' => 'cpa', 'Cpa.g.sc9.313' => 'cpa', 'Cpa.g.sc9.314' => 'cpa', 'Cre12.g501600' => 'cre', 'CsaV3_1G019640' => 'csa', 'CsaV3_3G015850' => 'csa', 'CsaV3_3G015960' => 'csa', 'CsaV3_5G010910' => 'csa', 'CsaV3_6G005320' => 'csa', 'CsaV3_6G013120' => 'csa', 'CsaV3_7G000510' => 'csa', 'CsaV3_7G000520' => 'csa', 'CsaV3_7G025120' => 'csa', 'CSS0001216' => 'camsi', 'CSS0008967' => 'camsi', 'CSS0010085' => 'camsi', 'CSS0010115' => 'camsi', 'CSS0018311' => 'camsi', 'CSS0019425' => 'camsi', 'CSS0026069' => 'camsi', 'CSS0029150' => 'camsi', 'CSS0037690' => 'camsi', 'CSS0040362' => 'camsi', 'CSS0041662' => 'camsi', 'CSS0044485' => 'camsi', 'CSS0047133' => 'camsi', 'CSS0049383' => 'camsi', 'DCAR_001125' => 'dca', 'DCAR_010092' => 'dca', 'DCAR_012720' => 'dca', 'DCAR_014428' => 'dca', 'DCAR_019806' => 'dca', 'DCAR_022792' => 'dca', 'DCAR_022924' => 'dca', 'DCAR_023944' => 'dca', 'DCAR_028432' => 'dca', 'Dinv05075' => 'din', 'Dinv12278' => 'din', 'Dinv21843' => 'din', 'Dinv23447' => 'din', 'Dinv34479' => 'din', 'Dinv41094' => 'din', 'Dinv41990' => 'din', 'Dinv44152' => 'din', 'Dinv44174' => 'din', 'Duzib052G0784' => 'dzi', 'Duzib093G0443' => 'dzi', 'Duzib093G2208' => 'dzi', 'Duzib106G0885' => 'dzi', 'Duzib114G0986' => 'dzi', 'Duzib116G0579' => 'dzi', 'Duzib132G0332' => 'dzi', 'Duzib151G0443' => 'dzi', 'Duzib168G1427' => 'dzi', 'Duzib211G0293' => 'dzi', 'Duzib212G0137' => 'dzi', 'Duzib248G1035' => 'dzi', 'Duzib268G0214' => 'dzi', 'ECA232G1008' => 'eca', 'ECA233G3899' => 'eca', 'ECA238G0676' => 'eca', 'ECA238G1236' => 'eca', 'ECA238G1336' => 'eca', 'ECA246G1086' => 'eca', 'ECA246G4596' => 'eca', 'ECA247G0298' => 'eca', 'ECA248G0670' => 'eca', 'EL10Ac1g00452' => 'bvu', 'EL10Ac1g01522' => 'bvu', 'EL10Ac3g06006' => 'bvu', 'EL10Ac7g15851' => 'bvu', 'EL10Ac9g21614' => 'bvu', 'EL10Ac9g22107' => 'bvu', 'Eucgr.A00102' => 'egr', 'Eucgr.D00737' => 'egr', 'Eucgr.F02715' => 'egr', 'Eucgr.G03135' => 'egr', 'Eucgr.H00344' => 'egr', 'Eucgr.I01335' => 'egr', 'Eucgr.J00119' => 'egr', 'Eucgr.L02536' => 'egr', 'FAN01G1084' => 'fan', 'FAN03G0936' => 'fan', 'FAN06G1028' => 'fan', 'FAN07G1598' => 'fan', 'FAN10G2188' => 'fan', 'FAN11G0402' => 'fan', 'FAN15G0339' => 'fan', 'FAN15G2661' => 'fan', 'FAN15G3617' => 'fan', 'FAN16G0194' => 'fan', 'FAN17G0288' => 'fan', 'FAN20G0383' => 'fan', 'FAN20G2605' => 'fan', 'FAN20G2885' => 'fan', 'FAN21G0349' => 'fan', 'FAN22G1058' => 'fan', 'FAN24G0034' => 'fan', 'FAN24G1549' => 'fan', 'FAN25G2413' => 'fan', 'FAN27G2291' => 'fan', 'FAN27G2934' => 'fan', 'FAN27G3144' => 'fan', 'FvH4_2g10670' => 'fve', 'FvH4_2g14020' => 'fve', 'FvH4_2g38831' => 'fve', 'FvH4_3g40470' => 'fve', 'FvH4_4g11161' => 'fve', 'FvH4_7g25870' => 'fve', 'Glyma.02G082800' => 'gma', 'Glyma.02G082900' => 'gma', 'Glyma.02G236200' => 'gma', 'Glyma.04G026200' => 'gma', 'Glyma.04G222200' => 'gma', 'Glyma.06G026000' => 'gma', 'Glyma.06G143200' => 'gma', 'Glyma.10G226000' => 'gma', 'Glyma.11G110400' => 'gma', 'Glyma.11G126600' => 'gma', 'Glyma.11G186700' => 'gma', 'Glyma.12G036400' => 'gma', 'Glyma.12G051200' => 'gma', 'Glyma.13G345200' => 'gma', 'Glyma.14G204100' => 'gma', 'Glyma.14G217200' => 'gma', 'Glyma.15G029100' => 'gma', 'Glyma.16G168400' => 'gma', 'Glyma.17G255800' => 'gma', 'Glyma.18G052500' => 'gma', 'Gohir.A02G011700' => 'ghi', 'Gohir.A02G064500' => 'ghi', 'Gohir.A03G077700' => 'ghi', 'Gohir.A03G199700' => 'ghi', 'Gohir.A05G270000' => 'ghi', 'Gohir.A05G278400' => 'ghi', 'Gohir.A05G403400' => 'ghi', 'Gohir.A06G179400' => 'ghi', 'Gohir.A07G162201' => 'ghi', 'Gohir.A09G212100' => 'ghi', 'Gohir.A10G139500' => 'ghi', 'Gohir.A10G179600' => 'ghi', 'Gohir.A13G086400' => 'ghi', 'Gohir.D02G012500' => 'ghi', 'Gohir.D02G070600' => 'ghi', 'Gohir.D02G070666' => 'ghi', 'Gohir.D02G097400' => 'ghi', 'Gohir.D02G221000' => 'ghi', 'Gohir.D04G012200' => 'ghi', 'Gohir.D05G272000' => 'ghi', 'Gohir.D05G280100' => 'ghi', 'Gohir.D06G186400' => 'ghi', 'Gohir.D07G168701' => 'ghi', 'Gohir.D09G205600' => 'ghi', 'Gohir.D10G127400' => 'ghi', 'Gohir.D10G186300' => 'ghi', 'Gohir.D12G222833' => 'ghi', 'Gohir.D13G090900' => 'ghi', 'Gorai.001G243800' => 'gra', 'Gorai.005G015900' => 'gra', 'Gorai.005G079600' => 'gra', 'Gorai.005G079700' => 'gra', 'Gorai.005G111000' => 'gra', 'Gorai.005G248900' => 'gra', 'Gorai.006G229500' => 'gra', 'Gorai.008G239000' => 'gra', 'Gorai.009G285000' => 'gra', 'Gorai.009G293600' => 'gra', 'Gorai.010G218700' => 'gra', 'Gorai.011G140400' => 'gra', 'Gorai.011G209200' => 'gra', 'Gorai.012G014500' => 'gra', 'Gorai.N000900' => 'gra', 'GSVIVG01009846001' => 'vvi', 'GSVIVG01010836001' => 'vvi', 'GSVIVG01024160001' => 'vvi', 'GSVIVG01024562001' => 'vvi', 'GSVIVG01032683001' => 'vvi', 'GSVIVG01034897001' => 'vvi', 'HanXRQChr01g0023491' => 'han', 'HanXRQChr04g0108981' => 'han', 'HanXRQChr05g0161581' => 'han', 'HanXRQChr07g0203701' => 'han', 'HanXRQChr08g0221531' => 'han', 'HanXRQChr09g0257911' => 'han', 'HanXRQChr09g0261991' => 'han', 'HanXRQChr10g0279081' => 'han', 'HanXRQChr15g0478361' => 'han', 'HanXRQChr17g0544331' => 'han', 'HanXRQChr17g0556461' => 'han', 'Haze_01463' => 'cav', 'Haze_02228' => 'cav', 'Haze_17353' => 'cav', 'Haze_17743' => 'cav', 'Haze_22593' => 'cav', 'Haze_24467' => 'cav', 'Hma1.2p1_0021F.1_g014350' => 'hma', 'Hma1.2p1_0032F.1_g020030' => 'hma', 'Hma1.2p1_0060F.1_g033416' => 'hma', 'Hma1.2p1_0119F.1_g056940' => 'hma', 'Hma1.2p1_0170F.1_g075020' => 'hma', 'Hma1.2p1_0208F.1_g088300' => 'hma', 'Hma1.2p1_0292F.1_g115940' => 'hma', 'Hma1.2p1_0616F.1_g189990' => 'hma', 'Hma1.2p1_0773F.1_g216260' => 'hma', 'Hma1.2p1_0844F.1_g227433' => 'hma', 'Hma1.2p1_0986F.1_g244420' => 'hma', 'Hma1.2p1_2182F.1_g316305' => 'hma', 'Hma1.2p1_2182F.1_g316310' => 'hma', 'Hma1.2p1_2415F.1_g321700' => 'hma', 'HPP92_001139' => 'vpl', 'HPP92_001546' => 'vpl', 'HPP92_002741' => 'vpl', 'HPP92_003294' => 'vpl', 'HPP92_004389' => 'vpl', 'HPP92_004429' => 'vpl', 'HPP92_011888' => 'vpl', 'HPP92_014625' => 'vpl', 'HPP92_014626' => 'vpl', 'HPP92_020939' => 'vpl', 'HPP92_022245' => 'vpl', 'HPP92_027067' => 'vpl', 'HPP92_027189' => 'vpl', 'HPP92_027282' => 'vpl', 'Hund00175' => 'sun', 'Hund00183' => 'sun', 'Hund03174' => 'sun', 'Hund05052' => 'sun', 'Hund06292' => 'sun', 'Hund12413' => 'sun', 'Hund13487' => 'sun', 'Hund17231' => 'sun', 'Hund26704' => 'sun', 'Hund26860' => 'sun', 'Hund29420' => 'sun', 'Lalb_Chr01g0003111' => 'lal', 'Lalb_Chr02g0141391' => 'lal', 'Lalb_Chr03g0025301' => 'lal', 'Lalb_Chr03g0035231' => 'lal', 'Lalb_Chr03g0035241' => 'lal', 'Lalb_Chr03g0036251' => 'lal', 'Lalb_Chr04g0251751' => 'lal', 'Lalb_Chr07g0184341' => 'lal', 'Lalb_Chr08g0239131' => 'lal', 'Lalb_Chr08g0239141' => 'lal', 'Lalb_Chr08g0246111' => 'lal', 'Lalb_Chr11g0067811' => 'lal', 'Lalb_Chr14g0369741' => 'lal', 'Lalb_Chr14g0372521' => 'lal', 'Lalb_Chr15g0085861' => 'lal', 'Lalb_Chr17g0345621' => 'lal', 'Lalb_Chr18g0054221' => 'lal', 'Lalb_Chr19g0138381' => 'lal', 'Lalb_Chr22g0352071' => 'lal', 'Lalb_Chr22g0354431' => 'lal', 'Lalb_Chr23g0272241' => 'lal', 'Lalb_Chr24g0396771' => 'lal', 'Lalb_Chr24g0398781' => 'lal', 'Lj1C966G14' => 'lonja', 'Lj1g0000054' => 'lja', 'Lj1g0009369' => 'lja', 'Lj2A1101G54' => 'lonja', 'Lj2g0016043' => 'lja', 'Lj2g0026470' => 'lja', 'Lj3C0G3' => 'lonja', 'Lj3C32T10' => 'lonja', 'Lj3C32T11' => 'lonja', 'Lj3g0000317' => 'lja', 'Lj3g0002701' => 'lja', 'Lj5g0000973' => 'lja', 'Lj5g0005070' => 'lja', 'Lj5g0027859' => 'lja', 'Lj6g0025552' => 'lja', 'Lj7A371G48' => 'lonja', 'Lj8A55T84' => 'lonja', 'Lj8C55T5' => 'lonja', 'Lj9A383G58' => 'lonja', 'Lj9A385T35' => 'lonja', 'LjContig00141g0020280' => 'lja', 'Lju682C3T1' => 'lonja', 'Lsat_1_v5_gn_1_100961' => 'lsa', 'Lsat_1_v5_gn_1_16700' => 'lsa', 'Lsat_1_v5_gn_1_46700' => 'lsa', 'Lsat_1_v5_gn_1_77800' => 'lsa', 'Lsat_1_v5_gn_1_8440' => 'lsa', 'Lsat_1_v5_gn_2_126181' => 'lsa', 'Lsat_1_v5_gn_2_21740' => 'lsa', 'Lsat_1_v5_gn_2_38660' => 'lsa', 'Lsat_1_v5_gn_3_44620' => 'lsa', 'Lsat_1_v5_gn_4_64741' => 'lsa', 'Lsat_1_v5_gn_4_97981' => 'lsa', 'Lsat_1_v5_gn_5_184360' => 'lsa', 'Lsat_1_v5_gn_5_57761' => 'lsa', 'Lsat_1_v5_gn_5_71180' => 'lsa', 'Lsat_1_v5_gn_5_92280' => 'lsa', 'Lsat_1_v5_gn_6_36400' => 'lsa', 'Lsat_1_v5_gn_6_97880' => 'lsa', 'Lsat_1_v5_gn_8_126941' => 'lsa', 'Lsat_1_v5_gn_8_126961' => 'lsa', 'Lsat_1_v5_gn_8_13621' => 'lsa', 'Lsat_1_v5_gn_9_59881' => 'lsa', 'Manes.02G178100' => 'mes', 'Manes.04G039500' => 'mes', 'Manes.04G082600' => 'mes', 'Manes.05G151400' => 'mes', 'Manes.10G001100' => 'mes', 'Manes.11G081300' => 'mes', 'Manes.11G123600' => 'mes', 'Manes.12G059262' => 'mes', 'Manes.18G090516' => 'mes', 'Manes.18G126808' => 'mes', 'Mapoly0007s0056' => 'mpo', 'Mapoly0046s0102' => 'mpo', 'MBI05_g26524_MAGBIO' => 'mbi', 'MBI07_g18518_MAGBIO' => 'mbi', 'MBI07_g42193_MAGBIO' => 'mbi', 'MBI15_g08962_MAGBIO' => 'mbi', 'MBI17_g44064_MAGBIO' => 'mbi', 'MD01G1167000' => 'mdo', 'MD03G1051900' => 'mdo', 'MD04G1043500' => 'mdo', 'MD04G1043600' => 'mdo', 'MD05G1022300' => 'mdo', 'MD05G1054500' => 'mdo', 'MD07G1233200' => 'mdo', 'MD08G1016000' => 'mdo', 'MD08G1016200' => 'mdo', 'MD10G1023800' => 'mdo', 'MD10G1146100' => 'mdo', 'MD11G1054000' => 'mdo', 'MD13G1271600' => 'mdo', 'MD15G1015000' => 'mdo', 'MD15G1015100' => 'mdo', 'Medtr0405s0060' => 'mtr', 'Medtr1g023690' => 'mtr', 'Medtr1g099030' => 'mtr', 'Medtr2g099050' => 'mtr', 'Medtr3g094020' => 'mtr', 'Medtr3g467120' => 'mtr', 'Medtr4g072090' => 'mtr', 'Medtr5g071680' => 'mtr', 'Medtr5g075390' => 'mtr', 'Medtr6g034945' => 'mtr', 'MELO3C006784.2' => 'cme', 'MELO3C006794.2' => 'cme', 'MELO3C008356.2' => 'cme', 'MELO3C013407.2' => 'cme', 'MELO3C013408.2' => 'cme', 'MELO3C020145.2' => 'cme', 'MELO3C023710.2' => 'cme', 'MELO3C026879.2' => 'cme', 'MELO3C033230.2' => 'cme', 'Migut.B00122' => 'egut', 'Migut.C01007' => 'egut', 'Migut.E00835' => 'egut', 'Migut.F00604' => 'egut', 'Migut.F01247' => 'egut', 'Migut.G01348' => 'egut', 'Migut.N01296' => 'egut', 'Migut.N03140' => 'egut', 'Migut.N03219' => 'egut', 'MSTRG.1358' => 'ama', 'MSTRG.16877' => 'ama', 'MSTRG.20020' => 'ama', 'MSTRG.22326' => 'ama', 'MSTRG.22328' => 'ama', 'MSTRG.24211' => 'ama', 'MSTRG.24257' => 'ama', 'MSTRG.24575' => 'ama', 'MSTRG.25317' => 'ama', 'MSTRG.5437' => 'ama', 'MSTRG.8376' => 'ama', 'MSTRG.8893' => 'ama', 'MSTRG.9757' => 'ama', 'Nitab4.5_0000032g0390' => 'nta', 'Nitab4.5_0000094g0150' => 'nta', 'Nitab4.5_0000242g0160' => 'nta', 'Nitab4.5_0000633g0080' => 'nta', 'Nitab4.5_0001242g0080' => 'nta', 'Nitab4.5_0001317g0020' => 'nta', 'Nitab4.5_0001586g0120' => 'nta', 'Nitab4.5_0001870g0010' => 'nta', 'Nitab4.5_0003413g0030' => 'nta', 'Nitab4.5_0004599g0090' => 'nta', 'Nitab4.5_0004908g0040' => 'nta', 'Nitab4.5_0005185g0040' => 'nta', 'Nitab4.5_0005266g0040' => 'nta', 'Nitab4.5_0005322g0010' => 'nta', 'Nitab4.5_0005489g0010' => 'nta', 'Nitab4.5_0006064g0050' => 'nta', 'Nitab4.5_0007623g0020' => 'nta', 'Nitab4.5_0008276g0020' => 'nta', 'Nitab4.5_0009616g0010' => 'nta', 'Nn1g09710' => 'nnu', 'Nn2g10316' => 'nnu', 'Nn5g26856' => 'nnu', 'Nn5g28705' => 'nnu', 'Nn5g29259' => 'nnu', 'Nn5g29514' => 'nnu', 'Nn6g32268' => 'nnu', 'Nn7g37592' => 'nnu', 'Oeu002963.1' => 'oeu', 'Oeu005868.1' => 'oeu', 'Oeu006053.1' => 'oeu', 'Oeu006137.1' => 'oeu', 'Oeu017665.1' => 'oeu', 'Oeu020496.1' => 'oeu', 'Oeu021822.1' => 'oeu', 'Oeu022456.1' => 'oeu', 'Oeu022458.1' => 'oeu', 'Oeu024476.1' => 'oeu', 'Oeu025468.1' => 'oeu', 'Oeu034446.1' => 'oeu', 'Oeu035037.1' => 'oeu', 'Oeu036537.1' => 'oeu', 'Oeu040315.1' => 'oeu', 'Oeu043084.1' => 'oeu', 'Oeu046251.1' => 'oeu', 'Oeu054419.1' => 'oeu', 'Oeu054712.4' => 'oeu', 'Oeu055647.2' => 'oeu', 'Oeu064765.1' => 'oeu', 'Os03g0127500' => 'osa', 'Os03g0336200' => 'osa', 'Os04g0181300' => 'osa', 'Os04g0495500' => 'osa', 'Os08g0543900' => 'osa', 'Os09g0516200' => 'osa', 'Os09g0520400' => 'osa', 'Os10g0531900' => 'osa', 'Os11g0160500' => 'osa', 'Os12g0162500' => 'osa', 'Peaxi162Scf00016g00044' => 'pax', 'Peaxi162Scf00051g00317' => 'pax', 'Peaxi162Scf00075g01549' => 'pax', 'Peaxi162Scf00141g00214' => 'pax', 'Peaxi162Scf00180g00131' => 'pax', 'Peaxi162Scf00184g00416' => 'pax', 'Peaxi162Scf00186g00117' => 'pax', 'Peaxi162Scf00287g01621' => 'pax', 'Peaxi162Scf00304g00518' => 'pax', 'Peaxi162Scf00362g01182' => 'pax', 'Peaxi162Scf00538g00237' => 'pax', 'Peaxi162Scf00739g00324' => 'pax', 'Peaxi162Scf01292g00028' => 'pax', 'Peaxi162Scf03101g00003' => 'pax', 'PGR042G2234' => 'pgr', 'PGR044G2173' => 'pgr', 'PGR083G1855' => 'pgr', 'PGR083G1956' => 'pgr', 'PGR142G0622' => 'pgr', 'PGR142G2076' => 'pgr', 'PGSC0003DMG400000799' => 'stu', 'PGSC0003DMG400001659' => 'stu', 'PGSC0003DMG400016651' => 'stu', 'PGSC0003DMG400017577' => 'stu', 'PGSC0003DMG400027599' => 'stu', 'PGSC0003DMG400029118' => 'stu', 'PGSC0003DMG401003720' => 'stu', 'Phvul.001G009000' => 'pvu', 'Phvul.004G097200' => 'pvu', 'Phvul.005G153900' => 'pvu', 'Phvul.006G078500' => 'pvu', 'Phvul.007G078900' => 'pvu', 'Phvul.007G079000' => 'pvu', 'Phvul.008G247800' => 'pvu', 'Phvul.009G142900' => 'pvu', 'Phvul.011G038200' => 'pvu', 'Phvul.011G053500' => 'pvu', 'Potri.002G069500' => 'ptr', 'Potri.004G163800' => 'ptr', 'Potri.005G190700' => 'ptr', 'Potri.007G130800' => 'ptr', 'Potri.009G125400' => 'ptr', 'Potri.013G091400' => 'ptr', 'Potri.013G156900' => 'ptr', 'Potri.017G027400' => 'ptr', 'Potri.019G057550' => 'ptr', 'Potri.019G130000' => 'ptr', 'Pp3c18_14260' => 'ppa', 'Pp3c19_15700' => 'ppa', 'Pp3c19_15710' => 'ppa', 'Pp3c19_15730' => 'ppa', 'Pp3c1_7300' => 'ppa', 'Pp3c22_13770' => 'ppa', 'Pp3c22_13810' => 'ppa', 'Pp3c22_13840' => 'ppa', 'Pp3c7_23340' => 'ppa', 'PRCOL_00003642' => 'pco', 'PRCOL_00005970' => 'pco', 'Prupe.1G197700' => 'ppe', 'Prupe.1G369300' => 'ppe', 'Prupe.2G263700' => 'ppe', 'Prupe.6G041400' => 'ppe', 'Prupe.6G181900' => 'ppe', 'Prupe.8G026300' => 'ppe', 'Prupe.8G184500' => 'ppe', 'Psat0s3019g0160' => 'psa', 'Psat0s603g0080' => 'psa', 'Psat2g051040' => 'psa', 'Psat2g051120' => 'psa', 'Psat5g069200' => 'psa', 'Psat5g148760' => 'psa', 'Psat5g269280' => 'psa', 'Psat5g289760' => 'psa', 'Psat6g004080' => 'psa', 'Psat6g193760' => 'psa', 'Psat6g193800' => 'psa', 'Psat7g181680' => 'psa', 'PSO017G4163' => 'pso', 'PSO017G6485' => 'pso', 'PSO063G6217' => 'pso', 'PSO170G2449' => 'pso', 'PSO210G4568' => 'pso', 'PSO339G4297' => 'pso', 'PSO384G1080' => 'pso', 'PSO541G5039' => 'pso', 'PSO675G1028' => 'pso', 'PSO675G7628' => 'pso', 'PSO675G8950' => 'pso', 'QL01p024610' => 'qlo', 'QL02p010953' => 'qlo', 'QL02p023149' => 'qlo', 'QL02p024154' => 'qlo', 'QL08p064787' => 'qlo', 'QL10p050736' => 'qlo', 'QL11p046604' => 'qlo', 'RcHm_v2.0_Chr1g0372151' => 'rch', 'RcHm_v2.0_Chr2g0157441' => 'rch', 'RcHm_v2.0_Chr4g0407301' => 'rch', 'RcHm_v2.0_Chr5g0073151' => 'rch', 'RcHm_v2.0_Chr6g0268361' => 'rch', 'RcHm_v2.0_Chr6g0275921' => 'rch', 'RcHm_v2.0_Chr6g0302431' => 'rch', 'Rhsim01G0242900' => 'rsi', 'Rhsim03G0151900' => 'rsi', 'Rhsim05G0067700' => 'rsi', 'Rhsim09G0018100' => 'rsi', 'Rhsim09G0022900' => 'rsi', 'Rhsim09G0027000' => 'rsi', 'Rhsim09G0185600' => 'rsi', 'RhsimUnG0195600' => 'rsi', 'Sabra04G0110000' => 'sbr', 'Sabra05G0145700' => 'sbr', 'Sabra07G0106200' => 'sbr', 'Sabra09G0096400' => 'sbr', 'Sabra13G0072600' => 'sbr', 'Sabra17G0016400' => 'sbr', 'Sabra19G0126900' => 'sbr', 'SalBow3G4456' => 'sbo', 'SalBow6G0903' => 'sbo', 'SalBow6G2178' => 'sbo', 'SalBow6G3237' => 'sbo', 'SalBow8G4031' => 'sbo', 'Sc02g0004190' => 'sci', 'Sc02g0005100' => 'sci', 'Sc08g0000970' => 'sci', 'Sc11g0005830' => 'sci', 'Sc12g0000110' => 'sci', 'Sc19g0002860' => 'sci', 'Sc21g0004840' => 'sci', 'Sed0002448' => 'sed', 'Sed0007084' => 'sed', 'Sed0007594' => 'sed', 'Sed0007908' => 'sed', 'Sed0009067' => 'sed', 'Sed0011538' => 'sed', 'Sed0013754' => 'sed', 'Sed0013936' => 'sed', 'Sed0019060' => 'sed', 'Sed0021879' => 'sed', 'Sed0022902' => 'sed', 'Sed0024431' => 'sed', 'Sed0025172' => 'sed', 'Sed0026015' => 'sed', 'Sed0026670' => 'sed', 'SEGI_06198' => 'sgi', 'SEGI_07056' => 'sgi', 'SEGI_09630' => 'sgi', 'SEGI_20718' => 'sgi', 'SEGI_26675' => 'sgi', 'SEGI_34892' => 'sgi', 'SEGI_37252' => 'sgi', 'SGA_v2.0_scaffold11G05886' => 'sas', 'SGA_v2.0_scaffold12G06168' => 'sas', 'SGA_v2.0_scaffold12G06169' => 'sas', 'SGA_v2.0_scaffold19G08676' => 'sas', 'SGA_v2.0_scaffold24G10380' => 'sas', 'SGA_v2.0_scaffold273G46412' => 'sas', 'SGA_v2.0_scaffold32G13257' => 'sas', 'SGA_v2.0_scaffold384G50435' => 'sas', 'SGA_v2.0_scaffold44G16619' => 'sas', 'SGA_v2.0_scaffold48G17974' => 'sas', 'SGA_v2.0_scaffold60G20891' => 'sas', 'SMO143G0256' => 'smo', 'SMO361G0400' => 'smo', 'Solyc01g110480.4' => 'sly', 'Solyc04g071160.3' => 'sly', 'Solyc04g081190.3' => 'sly', 'Solyc06g048630.3' => 'sly', 'Solyc06g049040.4' => 'sly', 'Solyc06g053350.3' => 'sly', 'Solyc06g060490.3' => 'sly', 'Sopen01g052610' => 'spe', 'Sopen04g027110' => 'spe', 'Sopen04g034800' => 'spe', 'Sopen06g014840' => 'spe', 'Sopen06g018410' => 'spe', 'Sopen06g020610' => 'spe', 'Sopen07g027590' => 'spe', 'Sp1g04880' => 'spa', 'Sp1g05580' => 'spa', 'Sp1g32720' => 'spa', 'Sp4g00410' => 'spa', 'Sp4g00420' => 'spa', 'Sp4g13850' => 'spa', 'Sp4g22950' => 'spa', 'Sp7g36940' => 'spa', 'TAR362G1027' => 'tar', 'TAR365G0470' => 'tar', 'TAR376G0650' => 'tar', 'TAR381G0656' => 'tar', 'TAR381G1037' => 'tar', 'TAR623G0042' => 'tar', 'TAR625G1363' => 'tar', 'TAR628G0503' => 'tar', 'TAR633G1959' => 'tar', 'TAR633G1994' => 'tar', 'TAR636G2766' => 'tar', 'THA.LOC104798876' => 'tha', 'THA.LOC104800891' => 'tha', 'THA.LOC104803207' => 'tha', 'THA.LOC104804107' => 'tha', 'THA.LOC104806854' => 'tha', 'THA.LOC104806906' => 'tha', 'THA.LOC104807778' => 'tha', 'THA.LOC104813190' => 'tha', 'THA.LOC104824361' => 'tha', 'THA.LOC104826197' => 'tha', 'Thecc.01G204300' => 'tca', 'Thecc.02G073600' => 'tca', 'Thecc.04G175500' => 'tca', 'Thecc.08G039200' => 'tca', 'Thecc.08G149400' => 'tca', 'Thecc.09G363600' => 'tca', 'Thecc.10G181700' => 'tca', 'Thhalv10000129m.g' => 'esa', 'Thhalv10000176m.g' => 'esa', 'Thhalv10007692m.g' => 'esa', 'Thhalv10008146m.g' => 'esa', 'Thhalv10011634m.g' => 'esa', 'Thhalv10016790m.g' => 'esa', 'Thhalv10016819m.g' => 'esa', 'Thhalv10024895m.g' => 'esa', 'TPR.G10145' => 'tpr', 'TPR.G16137' => 'tpr', 'TPR.G18312' => 'tpr', 'TPR.G18831' => 'tpr', 'TPR.G28162' => 'tpr', 'TPR.G28802' => 'tpr', 'TPR.G34377' => 'tpr', 'TPR.G36643' => 'tpr', 'TWI09G1184' => 'twi', 'TWI12G0039' => 'twi', 'TWI31G0661' => 'twi', 'TWI32G0434' => 'twi', 'TWI34G1237' => 'twi', 'TWI36G1594' => 'twi', 'TWI38G0634' => 'twi', 'TWI53G1259' => 'twi', 'TWI60G0773' => 'twi', 'TWI63G0668' => 'twi', 'TWI73G1270' => 'twi', 'TWI75G0980' => 'twi', 'TWI79G1629' => 'twi', 'TWI79G1748' => 'twi', 'unitig_0.g2400' => 'ugi', 'unitig_0.g260' => 'ugi', 'unitig_21.g20815' => 'ugi', 'unitig_26.g10002' => 'ugi', 'unitig_37.g13010' => 'ugi', 'unitig_46.g17961' => 'ugi', 'unitig_52.g17683' => 'ugi', 'unitig_578.g16747' => 'ugi', 'unitig_60.g25664' => 'ugi', 'unitig_744.g24272' => 'ugi', 'unitig_746.g26889' => 'ugi', 'unitig_749.g13999' => 'ugi', 'unitig_85.g27164' => 'ugi', 'vmacro00619' => 'vma', 'vmacro00620' => 'vma', 'vmacro00634' => 'vma', 'vmacro06889' => 'vma', 'vmacro09962' => 'vma', 'vmacro17412' => 'vma', 'VMungo0251G2405' => 'vmu', 'VMungo0251G2452' => 'vmu', 'VMungo0464G0836' => 'vmu', 'VMungo0540G1572' => 'vmu', 'VMungo0647G1058' => 'vmu', 'VMungo0647G2415' => 'vmu', 'VMungo0720G3142' => 'vmu', 'VMungo1080G0868' => 'vmu', 'VMungo1127G0027' => 'vmu', 'VMungo1127G2098' => 'vmu', 'VMungo1309G2402' => 'vmu', 'Zm00001eb002010' => 'zma', 'Zm00001eb016100' => 'zma', 'Zm00001eb021750' => 'zma', 'Zm00001eb037290' => 'zma', 'Zm00001eb037460' => 'zma', 'Zm00001eb078620' => 'zma', 'Zm00001eb092090' => 'zma', 'Zm00001eb102780' => 'zma', 'Zm00001eb103000' => 'zma', 'Zm00001eb111560' => 'zma', 'Zm00001eb139480' => 'zma', 'Zm00001eb198410' => 'zma', 'Zm00001eb198470' => 'zma', 'Zm00001eb202260' => 'zma', 'Zm00001eb318730' => 'zma', 'Zm00001eb318740' => 'zma', 'Zm00001eb330680' => 'zma', 'Zm00001eb395100' => 'zma', 'Zm00001eb403570' => 'zma', 'Zm00001eb407530' => 'zma' ) $gf_id = 'HOM05D000516' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000516' ) $data_identifier = 'HOM05D000516' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 41, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 5, 'aly' => (int) 11, 'aox' => (int) 6, 'arhy' => (int) 23, 'ath' => (int) 12, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 13, 'bca' => (int) 39, 'bol' => (int) 20, 'bra' => (int) 21, 'can' => (int) 8, 'cansat' => (int) 6, 'chi' => (int) 6, 'cru' => (int) 10, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 6, 'cde' => (int) 8, 'cfa' => (int) 4, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 9, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 14, 'dca' => (int) 9, 'din' => (int) 9, 'dzi' => (int) 13, 'eca' => (int) 9, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 22, 'fve' => (int) 6, 'gma' => (int) 20, 'ghi' => (int) 28, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 11, 'cav' => (int) 6, 'hma' => (int) 14, 'vpl' => (int) 14, 'sun' => (int) 11, 'lal' => (int) 23, 'lonja' => (int) 11, 'lja' => (int) 11, 'lsa' => (int) 21, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 15, 'mtr' => (int) 10, 'cme' => (int) 9, 'egut' => (int) 9, 'ama' => (int) 13, 'nta' => (int) 19, 'nnu' => (int) 8, 'oeu' => (int) 21, 'osa' => (int) 10, 'pax' => (int) 14, 'pgr' => (int) 6, 'stu' => (int) 7, 'pvu' => (int) 10, 'ptr' => (int) 10, 'ppa' => (int) 9, 'pco' => (int) 2, 'ppe' => (int) 7, 'psa' => (int) 12, 'pso' => (int) 11, 'qlo' => (int) 7, 'rch' => (int) 7, 'rsi' => (int) 8, 'sbr' => (int) 7, 'sbo' => (int) 5, 'sci' => (int) 7, 'sed' => (int) 15, 'sgi' => (int) 7, 'sas' => (int) 11, 'smo' => (int) 2, 'sly' => (int) 7, 'spe' => (int) 7, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 8, 'tpr' => (int) 8, 'twi' => (int) 14, 'ugi' => (int) 13, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 20 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb407530' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1